GENEALOGY-DNA-L Archives

From: "Ron Scott" <>
Subject: Re: [DNA] Chances for Finding Clade-separating SNP
Date: Fri, 4 Jan 2008 23:50:46 -0600

Tim,

In addition, what seems to me to be interesting is the number of times CSHL sequenced certain segments to predict homozygous bases, in some cases 25-30 times, in others only once. It looks like these excessive sequencing runs were undertaken because of a preoccupation with these sites rather than of ambiguous reads.

Any thoughts on this?

Ron Scott

This thread:

• Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ken Nordtvedt" <>
    • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
      • Re: [DNA] Chances for Finding Clade-separating SNP by "Ken Nordtvedt" <>
        • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
          • Re: [DNA] Chances for Finding Clade-separating SNP by "RICHARD KENYON" <>
            • [DNA] mtDNA H1 Phylogenetic Tree suggested by Denis Savard <>
              • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by "Rebekah Canada" <>
              • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by
                • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by marianne dillow <>
                  • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by marianne dillow <>
              • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by
                • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by Denis Savard <>
              • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by
                • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by "Ian Logan" <>
              • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by "Ron Scott" <>
                • Re: [DNA] mtDNA H1 Phylogenetic Tree suggested by marianne dillow <>
                • [DNA] mtDNA H Phylogenetic Tree suggested by Denis Savard <>
                  • Re: [DNA] mtDNA H Phylogenetic Tree suggested by
          • Re: [DNA] Chances for Finding Clade-separating SNP by "Alister John Marsh" <>
            • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
              • Re: [DNA] Chances for Finding Clade-separating SNP by "RICHARD KENYON" <>
          • Re: [DNA] Chances for Finding Clade-separating SNP by "Ken Nordtvedt" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by
    • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by Gareth Henson <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by Gareth Henson <>
    • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
    • [DNA] SNP chasing using STSs by "RICHARD KENYON" <>
      • Re: [DNA] SNP chasing using STSs by "Tim Janzen" <>
        • Re: [DNA] SNP chasing using STSs by "RICHARD KENYON" <>
          • [DNA] DNA- changes by age or circumstances by "Annie & Wal" <>
            • Re: [DNA] DNA- changes by age or circumstances by
              • Re: [DNA] DNA- changes by age or circumstances by "Annie & Wal" <>
        • Re: [DNA] SNP chasing using STSs by "Dennis Wright" <>
          • Re: [DNA] SNP chasing using STSs by "Tim Janzen" <>
      • Re: [DNA] SNP chasing using STSs by "Tim Janzen" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by Gareth Henson <>
    • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>

  • Re: [DNA] Chances for Finding Clade-separating SNP by "Ron Scott" <>

    • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>
      • Re: [DNA] Chances for Finding Clade-separating SNP by "RICHARD KENYON" <>
        • Re: [DNA] Chances for Finding Clade-separating SNP by "Tim Janzen" <>