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Archiver > GENEALOGY-DNA > 2011-01 > 1295784300


From: "Ian Logan" <>
Subject: [DNA] New mtDNA sequences from the Philippines & Taiwan(18-JAN-2011)
Date: Sun, 23 Jan 2011 12:05:00 -0000


List

22 new mtDNA sequences have appeared on GenBank to accompany the paper
(unpublished so far):-

Loo,J.-H., Trejaut,J.A., Lin,M., Chen,Y.-M., Yen,J.-C., Chen,Z.-S. and Lee,C.-L.
Genetic affinities between populations of Batanes and Orchid Islands
BMC Genet. (2011)

Note that 2 of the sequences are incomplete - they have lost their last few bases !

The sequences belong to haplogroups:-
B4a1a, B4a2a, B4c1b2, B5b1c, E2b1, F1a1, F1a3, F1a4, M7b3a, M7b4, M7c3, M7c3c, N9a,

As usual I have added the sequences to my CHECKER program.

Ian
www.inalogan.co.uk

(The 56 sequences from 'Peng' will come soon)

---------------------------------
HM238197(Philippines) Loo Haplogroup B4a1a 18-JAN-2011
A73G T146C T195C A263G 309.1C 309.2C 315.1C A523D C524D A750G
A1438G A2706G C3107D C4025T T5465C T6719C C7028T C8281D C8282D C8283D
C8284D C8285D T8286D C8287D T8288D A8289D A8860G G9123A T10238C G11719A
C12239T C14766T A15326G A15746G A16182- A16183- T16189C 16193.1C 16193.2C T16217C
C16261T T16519C

HM238198(Philippines) Loo Haplogroup B4c1b2 18-JAN-2011
A73G T146C C150T T195C A263G T310- C315- C320T C332A G709A
A750G T1119C A1438G A2706G C3497T C3571T A4769G T6221C C7028T C8281-
C8282- C8283- C8284- C8285- T8286- C8287- T8288- A8289- T8772C A8860G
G11719A C14766T G15301A A15326G G15346A T16140C A16182- A16183- T16189C 16193.1C
16193.2C T16217C G16274A A16335G A16497G T16519C

HM238199(Philippines) Loo Haplogroup F1a3 18-JAN-2011
A73G C150T A249- A263G 315.1C C522- A523- A750G A1438G A2706G
C3970T C4011T C4086T A4769G T6392C G6962A C7028T A8860G G9053A G9554A
T9944C G10310A T10609C G11719A G12406A C12882T T13502A A13748G G13759A G13928C
C14766T A15326G T15565C G16129A T16172C T16189C T16304C T16311C T16519C

HM238200(Philippines) Loo Haplogroup B4c1b2 18-JAN-2011
A73G T146C C150T T195C A263G 309.1C 309.2C 315.1C G709A A750G
T1119C A1438G A2706G C3497T C3571T C4707A A4769G C7028T G7598A C8281-
C8282- C8283- C8284- C8285- T8286- C8287- T8288- A8289- T8772C A8860G
G11719A C14766T G15301A A15326G G15346A T16140C A16182- A16183- T16189C 16193.1C
16193.2C T16217C G16274A A16335G T16519C

HM238201(Philippines) Loo Haplogroup B5b1c 18-JAN-2011
A73G G103A T152C T204C A263G 315.1C C522- A523- G709A A750G
960.1C A1275G A1438G G1598A A2706G T3396C A3480G C3819T A4769G A5836G
C7028T A7771G C8281- C8282- C8283- C8284- C8285- T8286- C8287- T8288-
A8289- C8467T G8584A A8784G C8829T A8860G T9950C T10274C A10398G G11719A
A12361G C14766T C15223T A15326G C15508T A15662G A15851G G15927A A16183- T16189C
16193.1C T16243C T16519C

HM238202(Philippines) Loo Haplogroup B4a1a 18-JAN-2011
A73G T146C A263G 309.1C 309.2C 315.1C A523D C524D A750G A1438G
C1601T A2706G C3107D A4769G T5465C A5978G A6113G T6719C C7028T C8281D
C8282D C8283D C8284D C8285D T8286D C8287D T8288D A8289D A8860G G9123A
T9865C T10238C G11719A C12239T C14766T A15326G A15746G A16182- A16183- T16189C
16193.1C 16193.2C T16217C C16261T T16519C

HM238203(Philippines) Loo Haplogroup M7c3 18-JAN-2011
A73G T146C T199C A263G 315.1C T489C C522- A523- A750G A1438G
A2706G A3606G C4071T A4769G C4850T T5442C C6455T C7028T A8701G A8860G
C9383T T9540C T9824C A10398G C10400T T10873C C11665T G11719A C12049T T12091C
C12705T G13204A C14766T T14783C G15043A A15236G G15301A A15326G C16223T C16242T
T16249C G16319A T16519C

HM238204(Philippines) Loo Haplogroup F1a4 18-JAN-2011
A73G T152C A249- A263G 309.1C 309.2C 315.1C C520- A521- C522-
A523- A750G A1438G A2706G T3456C C3970T C4086T A4769G G5985A T6392C
G6962A C7028T G7337A C8252G 8276.1C 8276.2C 8276.3C T8277C A8860G G9053A
G9548A G10310A T10609C G11719A G12406A A12810G C12882T A13422G G13759A G13928C
T14319C C14766T A15326G T15445C G16129A T16172C C16294T T16304C T16362C T16519C

HM238205(Philippines) Loo Haplogroup F1a3 18-JAN-2011
A73G A249- A263G 309.1C 315.1C C522- A523- A750G A1438G G1462A
A2706G C3970T C4086T A4769G T5302C T6392C G6962A C7028T A8860G G9053A
G9554A T9944C G10310A T10609C G11719A G12406A C12882T A13748G G13759A G13928C
C14766T A15326G C15452T T15565C T16093C G16129A T16172C C16256T T16304C T16311C
T16519C

HM238206(Philippines) Loo Haplogroup M7b4 18-JAN-2011
A73G C150T T152C T199C T204C A263G 309.1C 309.2C 315.1C T489C
A750G A1438G A2706G G3483A G4048A C4071T A4164G A4769G A5351G G5460A
C6455T T6680C C7028T A7052G T7142C T7684C G7853A A8701G A8860G T9540C
T9824C G10310A A10398G C10400T T10873C G11719A G11914A G12007A C12405T C12705T
T12811C C14766T T14783C G15043A G15301A A15326G C16223T T16297C T16519C

HM238207(Philippines) Loo Haplogroup B4a2a 18-JAN-2011
A73G A263G 309.1C 309.2C 315.1C A523D C524D A750G A1438G A2706G
C3107D A4769G T4823C T5465C G5824A A6131G T6167C T6620C C7028T C8281D
C8282D C8283D C8284D C8285D T8286D C8287D T8288D A8289D A8860G G9123A
C9812T G11719A C14766T A15326G G15777A G16129A A16182- A16183- T16189C 16193.1C
16193.2C T16217C C16261T T16324C T16519C

HM238208(Philippines) Loo Haplogroup N9a 18-JAN-2011
A73G C150T A263G 309.1C 315.1C A750G A1438G A2706G A4769G G5231A
G5417A 5899.1C C7028T A8860G T9428C G9755A G11719A A11968T A12358G G12372A
C12705T G12771A C14766T A15326G T16086C C16223T C16257A T16519C

HM238209(Taiwan) Loo Haplogroup F1a1 18-JAN-2011
A73G A249- A263G 309.1C 315.1C C522- A523- A750G A1438G A2706G
C3970T C4086T A4769G T6392C G6962A C7028T A8860G G9053A G9548A A10042G
G10310A T10609C A11380G G11719A G12406A C12882T G13759A G13928C G14305A C14766T
A15326G G16129A A16162G T16172C T16304C A16399G T16519C

HM238210(Taiwan) Loo Haplogroup M7b3a 18-JAN-2011
A73G T199C A263G 309.1C 315.1C T489C A750G A1438G G1664A C2068T
A2706G G4048A C4071T A4164G T4454C A4769G A5351G G5460A T6351C C6455T
T6680C C7028T T7684C G7853A A8701G A8860G A9468G T9540C T9824C A10398G
C10400T C10497T T10873C G11719A T12121C C12405T C12705T A12720G C14115T C14766T
T14783C G14905A G15043A G15301A A15326G T16086C G16129A T16297C T16324C

HM238211(Taiwan) Loo Haplogroup F1a1 18-JAN-2011
A73G A249- A263G 309.1C 315.1C C522- A523- A750G A1438G A2706G
C3970T C4086T A4769G T6392C G6962A C7028T A8860G G9053A G9548A A10042G
G10310A T10609C A11380G G11719A G12406A C12882T G13759A G13928C G14305A C14766T
A15326G G16129A A16162G T16172C C16260T T16304C A16399G T16519C

HM238212(Taiwan) Loo Haplogroup B4a1a (INCOMPLETE) 18-JAN-2011
A73G T146C A263G C522- A523- A750G A1438G A2706G C4025T T5465C
T6719C C7028T C8281- C8282- C8283- C8284- C8285- T8286- C8287- T8288-
A8289- A8860G G9123A T10238C G11719A C12239T C14766T A15326G A15746G A16182-
A16183- T16189C 16193.1C 16193.2C T16217C C16261T C16360A T16519C

HM238213(Taiwan) Loo Haplogroup B4a2a (INCOMPLETE) 18-JAN-2011
A73G A263G 309.1C 309.2C 315.1C C522- A523- A750G A1438G A2706G
A4769G T4823C T5465C G5824A A6131G T6620C C7028T C8281- C8282- C8283-
C8284- C8285- T8286- C8287- T8288- A8289- A8860G G9123A C9812T G11719A
C14766T A15326G G15777A G16129A A16182- A16183- T16189C T16217C C16261T T16324C
T16519C

HM238214(Taiwan) Loo Haplogroup B4c1b2 18-JAN-2011
A73G T146C C150T T195C A263G 315.1C G709A A750G T1119C A1438G
A2706G C3497T C3571T A4769G T4937C C7028T C7328T C8281- C8282- C8283-
C8284- C8285- T8286- C8287- T8288- A8289- T8772C A8860G G11719A G14305A
C14766T G15301A A15326G G15346A T16140C A16182- A16183- T16189C 16193.1C 16193.2C
T16217C G16274A A16335G T16519C

HM238215(Taiwan) Loo Haplogroup B4c1b2 18-JAN-2011
A73G T146C C150T T195C A263G 315.1C G709A A750G T1119C A1438G
A2706G C3497T C3571T A4769G T4937C C7028T C8281- C8282- C8283- C8284-
C8285- T8286- C8287- T8288- A8289- T8772C A8860G G11719A C14766T G15301A
A15326G G15346A T16140C A16182- A16183- T16189C 16193.1C 16193.2C T16217C G16274A
A16335G T16519C

HM238216(Taiwan) Loo Haplogroup E2b1 18-JAN-2011
A73G T195C A263G 315.1C T489C A750G A1438G A2706G T3027C G3705A
G4491A A4769G C7028T G7598A A8440G A8701G A8860G A9080G T9540C A10398G
C10400T T10873C G11719A C12705T C13626T C14766T T14783C G15043A A15178G G15301A
A15326G A16051G T16086C C16185T C16223T T16362C G16390A

HM238217(Taiwan) Loo Haplogroup F1a1 18-JAN-2011
A73G A249- A263G 309.1C 315.1C C522- A523- A750G A1438G A2706G
C3970T C4086T A4769G T6392C G6962A C7028T A8860G G9053A G9548A A10042G
G10310A T10609C A11380G G11719A G12406A C12882T G13759A G13928C G14305A C14766T
A15326G G16129A A16162G C16168T T16172C T16304C A16399G T16519C

HM238218(Taiwan) Loo Haplogroup M7c3c 18-JAN-2011
A73G T146C T199C A263G C295T 309.1C 309.2C 315.1C T489C C522-
A523- A750G A1438G A2706G T2887C A3606G A3714G C4071T G4659A A4769G
C4850T T5442C T5775C C6455T C7028T A8170G A8701G A8860G T9540C T9824C
A10398G C10400T T10873C C11665T G11719A A11893G T12091C C12705T C14766T T14783C
G15043A A15236G G15301A A15326G C16168T C16223T C16266T C16295T T16362C T16519C
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